WebCis-meQTL: associations between methylation sites and SNPs were extracted from BIOS QTL browser, a public source with available methylation quantitative trait loci (meQTL) data from 3841 Dutch ... WebJan 28, 2024 · Mapping based on eQTL was performed by using only SNP-gene pairs significant at FDR<0.05 in all tissues/cell types from 4 data repositories (GTEx , the Westra blood eQTL dataset , the BIOS QTL browser and BRAINEAC ); the available data only covers cis-eQTLs with up to 1 Mb distance between SNP and gene. Chromatin …
The emerging landscape of dynamic DNA methylation in early …
WebDec 5, 2016 · All QTLs can be found using our QTL browser ... (Fig. 2c and Supplementary Table 8). eQTLs with context-dependent effects can be obtained from our BIOS eQTL … open a non profit checking account online
Epigenome-wide analysis uncovers a blood-based DNA …
WebApr 30, 2024 · To assess the effect of DNA methylation at CpG sites on the expression of nearby genes, we used data from the BIOS QTL browser (Bonder et al., 2024; Bios … WebAug 6, 2024 · Finally, we used the BIOS QTL browser to gain functional insight into the 13 significant probes from the meta-analysis and to assess their putative effect on differential gene expression. Of the 13 sites, our top 2 hits on chromosome 1 (cg06193043 and cg24844545) were shown to be functionally associated with variability in expression of … WebBIOS QTL Browser (ref1 / ref2) Splice Site Analysis and ssSNPs / RNA Modifications . FIVEx (ref / GitHub) regSNPs-splicing (ref) dbNSFP (ref) ESM_Browser (Exonic Splicing … open an online bank account fnb